Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs11927101 chr3:125697489 T/C cg26321609 chr3:123680480 CCDC14 -1.18 -25.87 -0.8 8.16E-86 Box Plot
BLCA rs11928117 chr3:125742436 C/A cg26321609 chr3:123680480 CCDC14 -1.18 -26.98 -0.81 2.53E-90 Box Plot
BLCA rs12285986 chr11:50264837 C/T cg15704280 chr7:45808275 SEPT13 -1.02 -24.64 -0.78 9.01E-81 Box Plot
BLCA rs12416700 chr11:50409854 A/G cg15704280 chr7:45808275 SEPT13 -1.03 -24.41 -0.78 7.62E-80 Box Plot
BLCA rs12554995 chr9:33132044 A/G cg04842962 chr6:43655489 MRPS18A 1.05 26.95 0.81 3.27E-90 Box Plot
BLCA rs12554995 chr9:33132044 A/G cg20290983 chr6:43655470 MRPS18A 1.06 26.84 0.81 9.01E-90 Box Plot
BLCA rs12629208 chr3:125710383 T/A cg26321609 chr3:123680480 CCDC14 -1.18 -24.8 -0.79 1.9E-81 Box Plot
BLCA rs12630606 chr3:125742108 T/A cg26321609 chr3:123680480 CCDC14 -1.18 -26.98 -0.81 2.53E-90 Box Plot
BLCA rs12631986 chr3:125749810 T/C cg26321609 chr3:123680480 CCDC14 -1.17 -24.95 -0.79 4.5E-82 Box Plot
BLCA rs12633421 chr3:125760349 G/A cg26321609 chr3:123680480 CCDC14 -1.15 -26.07 -0.8 1.18E-86 Box Plot
BLCA rs12635522 chr3:125708174 C/A cg26321609 chr3:123680480 CCDC14 -1.18 -25.23 -0.79 3.28E-83 Box Plot
BLCA rs12636284 chr3:125709213 C/T cg26321609 chr3:123680480 CCDC14 -1.18 -26.57 -0.81 1.19E-88 Box Plot
BLCA rs12636296 chr3:125709050 G/T cg26321609 chr3:123680480 CCDC14 -1.18 -26.57 -0.81 1.19E-88 Box Plot
BLCA rs12786030 chr11:50371497 G/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.99 -0.79 3.24E-82 Box Plot
BLCA rs13077514 chr3:125751853 C/G cg26321609 chr3:123680480 CCDC14 -1.15 -25.62 -0.8 8.34E-85 Box Plot